HalophFGD

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Basic Information
Locus ID: Sgl34617
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Belongs to the NPH3 family
Maps and Mapping Data
Chromosome Start End Strand ID
chrA4 50441345 50454323 - Sgl34617
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.41 116,636.29 Da 36.82 91.58 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00693 secretory_peroxidase 28 327 1.3953E-150 IPR033905
Pfam PF00141 Peroxidase 317 447 1.5E-31 IPR002016
Pfam PF00141 Peroxidase 44 294 2.9E-70 IPR002016
Pfam PF00651 BTB/POZ domain 466 554 1.2E-7 IPR000210
Pfam PF03000 NPH3 family 646 898 3.2E-86 IPR027356
SUPERFAMILY SSF48113 Heme-dependent peroxidases 323 459 2.06E-35 IPR010255
SUPERFAMILY SSF54695 POZ domain 452 555 8.63E-17 IPR011333
SUPERFAMILY SSF48113 Heme-dependent peroxidases 28 323 3.09E-99 IPR010255
Gene3D G3DSA:1.10.420.10 Peroxidase, domain 2 418 454 9.7E-18 -
Gene3D G3DSA:1.10.520.10 - 340 417 9.7E-18 -
Gene3D G3DSA:1.10.520.10 - 31 322 2.5E-111 -
Gene3D G3DSA:1.10.420.10 Peroxidase, domain 2 168 309 2.5E-111 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 471 570 1.7E-9 IPR011333
SMART SM00225 BTB_4 470 574 2.1E-5 IPR000210
ProSiteProfiles PS51649 NPH3 domain profile. 645 922 87.396477 IPR027356
ProSiteProfiles PS50097 BTB domain profile. 470 538 10.737003 IPR000210
ProSiteProfiles PS50873 Plant heme peroxidase family profile. 27 323 72.770172 IPR002016
ProSiteProfiles PS50873 Plant heme peroxidase family profile. 324 446 30.713606 IPR002016
ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 190 200 - IPR019793
PRINTS PR00458 Haem peroxidase superfamily signature 190 205 1.0E-27 IPR002016
PRINTS PR00461 Plant peroxidase signature 123 133 2.1E-51 IPR000823
PRINTS PR00458 Haem peroxidase superfamily signature 142 154 1.0E-27 IPR002016
PRINTS PR00458 Haem peroxidase superfamily signature 250 265 1.0E-27 IPR002016
PRINTS PR00458 Haem peroxidase superfamily signature 59 73 1.0E-27 IPR002016
PRINTS PR00461 Plant peroxidase signature 264 281 2.1E-51 IPR000823
PRINTS PR00458 Haem peroxidase superfamily signature 124 141 1.0E-27 IPR002016
PRINTS PR00461 Plant peroxidase signature 248 263 2.1E-51 IPR000823
PRINTS PR00461 Plant peroxidase signature 61 81 2.1E-51 IPR000823
PRINTS PR00461 Plant peroxidase signature 37 56 2.1E-51 IPR000823
PRINTS PR00461 Plant peroxidase signature 142 157 2.1E-51 IPR000823
PRINTS PR00461 Plant peroxidase signature 304 317 2.1E-51 IPR000823
PRINTS PR00461 Plant peroxidase signature 189 201 2.1E-51 IPR000823
PRINTS PR00461 Plant peroxidase signature 102 115 2.1E-51 IPR000823
MobiDBLite mobidb-lite consensus disorder prediction 1046 1066 - -
Coils Coil Coil 961 981 - -
Gene Ontology
Biological Process:
GO:0006979 (response to oxidative stress) GO:0042744 (hydrogen peroxide catabolic process)
Molecular Function:
GO:0004601 (peroxidase activity) GO:0005515 (protein binding) GO:0020037 (heme binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G67385.1 Phototropic-responsive NPH3 family protein. 0
RefSeq XP_019105588.2 BTB/POZ domain-containing protein SR1IP1 isoform X1 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot Q66GP0 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana OX=3702 GN=SR1IP1 PE=1 SV=2 0
TrEMBL A0A803KY74 BTB/POZ domain-containing protein At5g67385-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg19646, jg39962
Aizoaceae Mesembryanthemum crystallinum 1 gene_23988
Amaranthaceae Atriplex hortensis 1 Ah027553
Amaranthaceae Beta vulgaris 1 BVRB_6g127900
Amaranthaceae Salicornia bigelovii 2 Sbi_jg13133, Sbi_jg52713
Amaranthaceae Suaeda aralocaspica 1 GOSA_00010130
Amaranthaceae Suaeda glauca 4 Sgl34617, Sgl40037, Sgl40039, Sgl40040
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000003776, gene:ENSEOMG00000025649
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.6AG0026050, CQ.Regalona.r1.6BG0027490
Anacardiaceae Pistacia vera 1 pistato.v30205270
Apiaceae Apium graveolens 2 Ag5G00320, Ag9G01303
Arecaceae Cocos nucifera 2 COCNU_05G002880, COCNU_13G006600
Arecaceae Phoenix dactylifera 1 gene-LOC103705276
Asparagaceae Asparagus officinalis 2 AsparagusV1_08.1280.V1.1, AsparagusV1_08.1281.V1.1
Asteraceae Flaveria trinervia 3 Ftri13G25870, Ftri18G03270, Ftri6G33099
Brassicaceae Arabidopsis thaliana 2 AT3G49970.1, AT5G67385.1
Brassicaceae Eutrema salsugineum 2 Thhalv10003858m.g.v1.0, Thhalv10010248m.g.v1.0
Brassicaceae Schrenkiella parvula 2 Sp2g29280.v2.2, Sp5g12120.v2.2
Brassicaceae Brassica nigra 3 BniB04g000440.2N, BniB06g014470.2N, BniB08g063960.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq05G1402
Casuarinaceae Casuarina glauca 1 Cgl05G1402
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno01g09360
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-10070, nbisL1-mrna-4725
Nitrariaceae Nitraria sibirica 1 evm.TU.LG06.1510
Plantaginaceae Plantago ovata 2 Pov_00023820, Pov_00030522
Plumbaginaceae Limonium bicolor 5 Lb1G05409, Lb1G05428, Lb1G05494, Lb1G05504, Lb3G16555
Poaceae Echinochloa crus-galli 3 AH01.4585, BH01.2544, Contig181.8
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_3AG0238080, gene-QOZ80_3BG0289940
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.4HG0398130.1
Poaceae Lolium multiflorum 1 gene-QYE76_070038
Poaceae Oryza coarctata 2 Oco05G005960, Oco06G006110
Poaceae Oryza sativa 1 LOC_Os03g10880.1
Poaceae Paspalum vaginatum 1 gene-BS78_01G436900
Poaceae Puccinellia tenuiflora 2 Pt_Chr0101609, Pt_Chr0404867
Poaceae Sporobolus alterniflorus 2 Chr01G027130, Chr12G012250
Poaceae Thinopyrum elongatum 1 Tel4E01G433600
Poaceae Triticum dicoccoides 3 gene_TRIDC4AG006850, gene_TRIDC4BG044330 ...
gene_TRIDC4BG044340
Poaceae Triticum aestivum 3 TraesCS4A02G049300.1, TraesCS4B02G255500.1 ...
TraesCS4D02G255500.1
Poaceae Zea mays 1 Zm00001eb007280_P002
Poaceae Zoysia japonica 2 nbis-gene-2537, nbis-gene-4116
Poaceae Zoysia macrostachya 2 Zma_g1827, Zma_g4184
Portulacaceae Portulaca oleracea 2 evm.TU.LG05.95, evm.TU.LG25.1239
Posidoniaceae Posidonia oceanica 1 gene.Posoc03g20210
Rhizophoraceae Bruguiera sexangula 2 evm.TU.Scaffold_3_RagTag.1213, evm.TU.Scaffold_6_RagTag.1805
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-17346
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-2345
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-11963
Rhizophoraceae Kandelia candel 1 evm.TU.utg000011l.1102
Rhizophoraceae Kandelia obovata 1 Maker00007725
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-15460, nbisL1-mrna-6205
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-1915, nbisL1-mrna-3279
Salicaceae Populus euphratica 2 populus_peu29941, populus_peu38013
Solanaceae Lycium barbarum 2 gene-LOC132622277, gene-LOC132623087
Solanaceae Solanum chilense 3 SOLCI005356500, SOLCI005529300, SOLCI005650500
Solanaceae Solanum pennellii 2 gene-LOC107009000, gene-LOC107011223
Tamaricaceae Reaumuria soongarica 1 gene_3815
Tamaricaceae Tamarix chinensis 1 TC04G1866
Zosteraceae Zostera marina 2 Zosma05g08020.v3.1, Zosma05g22590.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.