Basic Information
Locus ID:
Sgl33483
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 41769859 | 41771808 | - | Sgl33483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 48,176.90 Da | 42.81 | 108.43 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 169 | 228 | 1.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 84 | 1.3E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 264 | 283 | 1.4 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 411 | 5.44E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 214 | 1.6E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 215 | 410 | 2.0E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 262 | 286 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 215 | 9.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 166 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 167 | 191 | 17.0 | IPR003591 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_021859954.1 | DNA damage-repair/toleration protein DRT100 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9S068 | LRRNT_2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_014320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology