Basic Information
Locus ID:
Sgl32363
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 25835748 | 25839742 | + | Sgl32363 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 99,323.55 Da | 38.97 | 88.84 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 573 | 846 | 7.65406E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 571 | 837 | 5.7E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 57 | 5.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 377 | 417 | 2.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 316 | 354 | 0.25 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 550 | 843 | 1.01E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 429 | 7.48E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 645 | 868 | 2.3E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 317 | 442 | 4.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 315 | 4.7E-69 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 529 | 644 | 2.3E-35 | - |
| SMART | SM00369 | LRR_typ_2 | 226 | 249 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 380 | 403 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 567 | 847 | 2.5E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 2.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 180 | 203 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 156 | 380.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 567 | 847 | 40.92289 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 573 | 595 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 692 | 704 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 466 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010673522.1 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLX7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology