Basic Information
Locus ID:
Sgl32061
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 19207718 | 19213434 | + | Sgl32061 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 60,078.29 Da | 35.63 | 81.62 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00800 | Prephenate dehydratase | 400 | 475 | 3.8E-9 | IPR001086 |
| Pfam | PF10551 | MULE transposase domain | 5 | 39 | 1.6E-8 | IPR018289 |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | 402 | 474 | 9.99E-7 | - |
| Gene3D | G3DSA:3.40.190.10 | - | 394 | 474 | 1.1E-10 | - |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 227 | 263 | 9.396204 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 381 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08250.1 | arogenate dehydratase 6. Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays. | 0 |
| RefSeq | XP_048497884.1 | protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGD6 | Arogenate dehydratase/prephenate dehydratase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ADT6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A484N1W4 | Protein FAR1-RELATED SEQUENCE OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS35770 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00014604, GOSA_00014605, GOSA_00014807, GOSA_00023619 |
| Amaranthaceae | Suaeda glauca | 69 | Sgl00340, Sgl00670, Sgl00740, Sgl00768, Sgl02587, Sgl03588 ... |
| Plumbaginaceae | Limonium bicolor | 3 | Lb0G37147, Lb3G20849, Lb6G29885 |
| Tamaricaceae | Reaumuria soongarica | 2 | MSTRG.16888_chr09_+, STRG.24247_chr10_+ |