Basic Information
Locus ID:
Sgl31154
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 4472315 | 4495288 | - | Sgl31154 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 212,809.47 Da | 48.89 | 79.01 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 622 | 894 | 9.64275E-124 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1665 | 1928 | 1.55621E-144 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 642 | 882 | 7.1E-32 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1704 | 1870 | 2.9E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1653 | 1928 | 1.47E-78 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 688 | 860 | 3.4E-38 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1786 | 1929 | 4.2E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 687 | 860 | 1.2E-49 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1623 | 1785 | 9.1E-35 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1642 | 1929 | 4.7E-116 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1602 | 1928 | 58.544388 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1360 | 1402 | - | - |
| Coils | Coil | Coil | 821 | 841 | - | - |
| Coils | Coil | Coil | 37 | 40 | - | - |
| Coils | Coil | Coil | 2 | 2 | - | - |
| Coils | Coil | Coil | 724 | 744 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_048502539.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LJQ8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology