Basic Information
Locus ID:
Sgl29904
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 52199350 | 52204693 | + | Sgl29904 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 56,839.44 Da | 44.09 | 80.70 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 223 | 450 | 1.7E-60 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 209 | 1.9E-74 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 8 | 218 | 3.9E-78 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 219 | 451 | 4.2E-116 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 241 | 416 | 4.2E-116 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 500 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 500 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_021722085.1 | proteinaceous RNase P 2-like isoform X1 [Chenopodium quinoa] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology