Basic Information
Locus ID:
Sgl29789
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 51449208 | 51451205 | + | Sgl29789 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 69,786.25 Da | 43.85 | 87.75 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 209 | 240 | 0.00164031 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 400 | 616 | 5.0E-37 | IPR000719 |
| Pfam | PF01476 | LysM domain | 209 | 243 | 6.2E-4 | IPR018392 |
| Pfam | PF04478 | Mid2 like cell wall stress sensor | 275 | 317 | 3.3E-6 | IPR007567 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 366 | 591 | 5.06E-57 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 206 | 258 | 2.3E-6 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 359 | 448 | 2.0E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 637 | 2.6E-43 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 664 | 31.509645 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 202 | 246 | 9.699794 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 279 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021856141.1 | protein LYK5 isoform X1 [Spinacia oleracea] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S2X7 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_000660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology