Basic Information
Locus ID:
Sgl29541
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 49810093 | 49812810 | - | Sgl29541 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 99,201.83 Da | 30.87 | 103.81 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 293 | 308 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 74 | 5.7E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 533 | 592 | 6.3E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 367 | 386 | 0.83 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 712 | 886 | 1.7E-35 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 80 | 136 | 1.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 174 | 232 | 1.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 354 | 1.02E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 706 | 886 | 1.03E-50 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 285 | 594 | 3.37E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 353 | 628 | 1.1E-78 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 352 | 4.3E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 187 | 6.0E-42 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 699 | 893 | 8.4E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 254 | 8.4E-20 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 100 | 123 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 316 | 340 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 462 | 484 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 555 | 579 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 350.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 905 | 8.2E-11 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 22.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 905 | 30.166916 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 438 | 460 | 7.21911 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 838 | 850 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 740 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 579 | 592 | 2.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 558 | 571 | 2.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KNM5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology