Basic Information
Locus ID:
Sgl29531
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 49733799 | 49737774 | + | Sgl29531 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 71,602.47 Da | 48.75 | 89.48 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06222 | RNase_H_like | 426 | 549 | 1.37795E-20 | IPR044730 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 31 | 96 | 3.4E-10 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 103 | 234 | 8.2E-11 | IPR000719 |
| Pfam | PF13456 | Reverse transcriptase-like | 427 | 549 | 3.7E-16 | IPR002156 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 34 | 242 | 2.81E-38 | IPR011009 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 424 | 554 | 3.64E-8 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 423 | 556 | 2.5E-6 | IPR036397 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 26 | 99 | 8.5E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 100 | 264 | 1.4E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 237 | 14.661919 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QDZ4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14617 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl24358, Sgl29531 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G2529 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G04505 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G013950 |