Basic Information
Locus ID:
Sgl28074
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 39201656 | 39212365 | + | Sgl28074 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 98,404.11 Da | 44.46 | 84.69 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 36 | 161 | 2.87728E-20 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 346 | 431 | 2.75848E-24 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 517 | 589 | 1.2E-11 | IPR001245 |
| Pfam | PF01453 | D-mannose binding lectin | 73 | 187 | 5.4E-27 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 592 | 693 | 4.1E-7 | IPR001245 |
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 782 | 876 | 3.5E-26 | IPR027486 |
| Pfam | PF08276 | PAN-like domain | 350 | 415 | 4.6E-21 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 220 | 329 | 5.6E-28 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 502 | 722 | 5.88E-36 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 72 | 227 | 3.27E-19 | IPR036426 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 780 | 877 | 5.23E-29 | IPR036838 |
| Gene3D | G3DSA:2.90.10.10 | - | 20 | 158 | 6.4E-16 | IPR036426 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 765 | 879 | 1.9E-46 | IPR036838 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 479 | 587 | 1.7E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 588 | 701 | 5.4E-12 | - |
| SMART | SM00108 | blect_4 | 31 | 161 | 1.4E-20 | IPR001480 |
| SMART | SM01403 | Ribosomal_S10_2 | 782 | 876 | 6.5E-39 | IPR027486 |
| SMART | SM00473 | ntp_6 | 350 | 430 | 2.0E-12 | IPR003609 |
| TIGRFAM | TIGR01046 | uS10_euk_arch: ribosomal protein uS10 | 779 | 877 | 5.2E-38 | IPR005729 |
| PIRSF | PIRSF000641 | SRK | 1 | 590 | 2.8E-154 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 591 | 729 | 3.8E-44 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 350 | 431 | 11.045044 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 516 | 880 | 10.25211 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 24 | 152 | 14.243711 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 522 | 545 | - | IPR017441 |
| ProSitePatterns | PS00361 | Ribosomal protein S10 signature. | 804 | 819 | - | IPR018268 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 780 | 793 | 7.4E-12 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 837 | 851 | 7.4E-12 | IPR001848 |
| PRINTS | PR00971 | Ribosomal protein S10 family signature | 815 | 830 | 7.4E-12 | IPR001848 |
| Hamap | MF_00508 | 30S ribosomal protein S10 [rpsJ]. | 778 | 877 | 18.607302 | IPR001848 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27290.2 | - | 0 |
| RefSeq | XP_034678683.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Vitis riparia] | 0 |
| O81832 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana OX=3702 GN=At4g27290 PE=3 SV=4 | 0 | |
| TrEMBL | A0A5B6Z6J3 | Non-specific serine/threonine protein kinase (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009115 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology