Basic Information
Locus ID:
Sgl27967
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
acid phosphatase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 38099215 | 38116767 | - | Sgl27967 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 128,585.98 Da | 40.77 | 93.08 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 762 | 965 | 1.26453E-45 | - |
| CDD | cd11566 | eIF1_SUI1 | 1047 | 1130 | 3.70472E-51 | IPR005874 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 906 | 954 | 2.6E-7 | IPR000477 |
| Pfam | PF01253 | Translation initiation factor SUI1 | 1046 | 1120 | 1.0E-24 | IPR001950 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 768 | 892 | 3.5E-21 | IPR000477 |
| SUPERFAMILY | SSF56219 | DNase I-like | 279 | 509 | 2.09E-28 | IPR036691 |
| SUPERFAMILY | SSF55159 | eIF1-like | 1016 | 1131 | 3.01E-33 | IPR036877 |
| Gene3D | G3DSA:3.30.780.10 | - | 1014 | 1131 | 2.0E-46 | - |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 276 | 510 | 4.7E-31 | IPR036691 |
| TIGRFAM | TIGR01160 | SUI1_MOF2: translation initiation factor SUI1 | 1024 | 1131 | 6.5E-54 | IPR005874 |
| ProSiteProfiles | PS50296 | Translation initiation factor SUI1 family profile. | 1049 | 1119 | 24.534607 | IPR001950 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54290.1 | Translation initiation factor SUI1 family protein. | 0 |
| RefSeq | XP_048497307.1 | uncharacterized protein LOC104885230 [Beta vulgaris subsp. vulgaris] | 0 |
| Q94JV4 | Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2N9H0F6 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33237 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||