HalophFGD

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Basic Information
Locus ID: Sgl27827
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Transposase family tnp2
Maps and Mapping Data
Chromosome Start End Strand ID
chrB3 36875820 36876218 + Sgl27827
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.08 14,936.16 Da 49.02 64.32 -0.40
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF02992 Transposase family tnp2 12 131 3.7E-51 IPR004242
Best hit
Source Best Hit ID Description E-value
RefSeq XP_010668091.2 uncharacterized protein LOC104885083 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A2I5F1 Transposon-like protein OS=Beta vulgaris OX=161934 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 3 Sgl04115, Sgl09174, Sgl27827
Plumbaginaceae Limonium bicolor 2 Lb1G00291, Lb6G31335
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.