Basic Information
Locus ID:
Sgl26624
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
high mobility group
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 15553858 | 15558159 | - | Sgl26624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 27,529.97 Da | 53.64 | 76.81 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01388 | ARID/BRIGHT DNA binding domain | 77 | 141 | 3.4E-14 | IPR001606 |
| SUPERFAMILY | SSF46774 | ARID-like | 76 | 146 | 4.19E-22 | IPR036431 |
| Gene3D | G3DSA:1.10.150.60 | - | 62 | 153 | 4.4E-21 | IPR036431 |
| SMART | SM00501 | bright_3 | 62 | 147 | 3.9E-13 | IPR001606 |
| SMART | SM01014 | ARID_2 | 62 | 141 | 3.4E-14 | - |
| ProSiteProfiles | PS51011 | ARID domain profile. | 54 | 145 | 20.326723 | IPR001606 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 45 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04880.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain. | 0 |
| RefSeq | XP_021749149.1 | high mobility group B protein 15-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9MAT6 | High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LZC3 | High mobility group B protein 15-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology