Basic Information
Locus ID:
Sgl26240
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 9046987 | 9053569 | - | Sgl26240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 48,432.38 Da | 52.28 | 88.05 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10440 | Ubiquitin-binding WIYLD domain | 18 | 77 | 9.5E-20 | IPR018848 |
| Pfam | PF03763 | Remorin, C-terminal region | 85 | 141 | 1.8E-13 | IPR005516 |
| Pfam | PF00069 | Protein kinase domain | 209 | 294 | 2.0E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 187 | 305 | 1.08E-22 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 171 | 280 | 2.4E-27 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 288 | 370 | 3.1E-5 | - |
| Gene3D | G3DSA:1.10.8.850 | - | 17 | 77 | 2.0E-15 | IPR043017 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 206 | 421 | 11.679645 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 212 | 234 | - | IPR017441 |
| Coils | Coil | Coil | 86 | 113 | - | - |
| Coils | Coil | Coil | 320 | 340 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48210.4 | - | 0 |
| RefSeq | XP_010672613.1 | pto-interacting protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0J8CU05 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_3g059830 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 4 | Sgl15036, Sgl20171, Sgl20859, Sgl26240 |
| Apiaceae | Apium graveolens | 2 | Ag5G01785, Ag8G01818 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC120107410, gene-LOC120109347 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014142 |