Basic Information
Locus ID:
Sgl26042
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB3 | 4904141 | 4909462 | + | Sgl26042 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 48,150.54 Da | 50.47 | 64.46 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13423 | Ubiquitin carboxyl-terminal hydrolase | 183 | 413 | 5.3E-12 | IPR028881 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 227 | 426 | 4.91E-36 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 195 | 427 | 4.4E-40 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 184 | 428 | 19.718075 | IPR028889 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 192 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_010681055.2 | ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MCI2 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||