Basic Information
Locus ID:
Sgl25444
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 62616614 | 62619742 | + | Sgl25444 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 23,609.74 Da | 48.88 | 90.34 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 77 | 176 | 6.0E-8 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 11 | 76 | 4.3E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 195 | 2.98E-29 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 65 | 188 | 8.0E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 64 | 1.2E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 207 | 9.61608 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_039169863.1 | putative cysteine-rich receptor-like protein kinase 31 [Eucalyptus grandis] | 0 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 0 | |
| TrEMBL | A0A835LIZ1 | Cysteine-rich receptor-like protein kinase 25 OS=Coptis chinensis OX=261450 GN=IFM89_018807 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1588 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023813 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl25444, Sgl25455 |
| Apiaceae | Apium graveolens | 1 | Ag8G01866 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132629060 |