HalophFGD

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Basic Information
Locus ID: Sgl25417
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Serine threonine-protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
chrA3 62329362 62335087 - Sgl25417
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.09 27,419.41 Da 28.58 87.30 0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00450 Serine carboxypeptidase 169 236 5.8E-11 IPR001563
SUPERFAMILY SSF53474 alpha/beta-Hydrolases 102 235 5.11E-14 IPR029058
Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase 74 240 5.4E-18 IPR029058
Gene Ontology
Biological Process:
GO:0006508 (proteolysis)
Molecular Function:
GO:0004185 (serine-type carboxypeptidase activity)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G22980.1 serine carboxypeptidase-like 13. 0
RefSeq XP_048490908.1 serine carboxypeptidase-like 18 isoform X5 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot Q8H780 Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana OX=3702 GN=SCPL13 PE=2 SV=2 0
TrEMBL A0A803M5J2 Serine carboxypeptidase-like 18 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 4 Sgl25214, Sgl25415, Sgl25417, Sgl30365
Poaceae Zea mays 1 Zm00001eb054270_P001
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-1474
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.