halophFGD

Basic Information

Locus ID: Sgl25057

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: F-Box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrA3	58238754	58239998	+	Sgl25057

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.24	47,482.04 Da	28.98	91.79	-0.27

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	26	115	9.16E-8	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	24	112	3.3E-6	-
SMART	SM00256	fbox_2	27	68	0.0014	IPR001810
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	120	328	3.9E-18	IPR017451

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G12560.1	F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.	0
RefSeq	XP_021765772.1	F-box protein CPR30-like isoform X1 [Chenopodium quinoa]	0
Swiss-Prot	Q9SU30	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	0
TrEMBL	A0A0K9R052	F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_126980 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl25057, Sgl30218