Basic Information
Locus ID:
Sgl24523
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
WD repeat domain phosphoinositide-interacting protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 54249347 | 54254533 | - | Sgl24523 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.76 | 39,793.48 Da | 51.28 | 78.07 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 9 | 325 | 2.02E-26 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 332 | 7.2E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1 | 35 | 280.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 162 | 202 | 1.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 205 | 246 | 0.32 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G62770.1 | Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence. | 0 |
| RefSeq | XP_021847186.1 | autophagy-related protein 18a-like [Spinacia oleracea] | 0 |
| Q93VB2 | Autophagy-related protein 18a OS=Arabidopsis thaliana OX=3702 GN=ATG18A PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QB01 | Autophagy-related protein 18a OS=Spinacia oleracea OX=3562 GN=SOVF_199660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology