Basic Information
Locus ID:
Sgl24365
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 53203482 | 53207483 | - | Sgl24365 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 112,277.70 Da | 30.66 | 101.92 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 533 | 592 | 6.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 80 | 136 | 1.4E-7 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 293 | 308 | 1.5 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 712 | 985 | 1.1E-46 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 367 | 386 | 0.95 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 174 | 232 | 1.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 74 | 6.6E-6 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 285 | 594 | 1.73E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 707 | 988 | 1.64E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 354 | 8.33E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 352 | 628 | 1.3E-78 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 184 | 7.9E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 254 | 351 | 1.3E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 253 | 7.0E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 793 | 1008 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 792 | 3.8E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 462 | 484 | 260.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 988 | 6.4E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 316 | 340 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 123 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 555 | 579 | 59.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 995 | 38.463573 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 438 | 460 | 7.21911 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 740 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 838 | 850 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 579 | 592 | 3.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 558 | 571 | 3.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QDZ4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology