Basic Information
Locus ID:
Sgl23568
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 47463453 | 47465609 | + | Sgl23568 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 80,558.10 Da | 37.17 | 91.73 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 56 | 283 | 4.44324E-84 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 390 | 659 | 1.69717E-103 | - |
| Pfam | PF00139 | Legume lectin domain | 55 | 290 | 7.2E-61 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 384 | 654 | 1.0E-49 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 39 | 285 | 1.87E-63 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 365 | 678 | 7.42E-82 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 52 | 300 | 2.5E-67 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 677 | 4.1E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 459 | 4.8E-28 | - |
| SMART | SM00220 | serkin_6 | 384 | 656 | 2.0E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 384 | 673 | 38.972397 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 168 | 174 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 390 | 413 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 507 | 519 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010675950.2 | probable L-type lectin-domain containing receptor kinase S.7 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MWM2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology