halophFGD

Basic Information

Locus ID: Sgl22131

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrA3	33818700	33819797	-	Sgl22131

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.62	17,455.83 Da	53.36	88.80	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF08423	Rad51	2	84	1.4E-6	IPR013632
Pfam	PF04597	Ribophorin I	108	158	3.3E-8	IPR007676
Gene3D	G3DSA:3.40.50.300	-	1	110	2.2E-11	IPR027417
ProSiteProfiles	PS50162	RecA family profile 1.	1	25	11.623296	IPR020588

Gene Ontology

Biological Process:

GO:0006281 (DNA repair) GO:0006486 (protein glycosylation)

Molecular Function:

GO:0003677 (DNA binding) GO:0005524 (ATP binding) GO:0008094 (ATP-dependent activity, acting on DNA)

Cellular Component:

GO:0016020 (membrane)

KEGG Pathway

KO Term:

K12666 (dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I))

Pathway:

ko00510 (N-Glycan biosynthesis) map00510 (N-Glycan biosynthesis) ko00513 (Various types of N-glycan biosynthesis) map00513 (Various types of N-glycan biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko04141 (Protein processing in endoplasmic reticulum) map04141 (Protein processing in endoplasmic reticulum)

Module:

M00072 (N-glycosylation by oligosaccharyltransferase)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G76400.2	-
RefSeq	XP_021746505.1	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A-like [Chenopodium quinoa]
Swiss-Prot	Q9SFX3	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Arabidopsis thaliana OX=3702 GN=OST1A PE=2 SV=1
TrEMBL	A0A803M6N5	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	9	Sgl00460, Sgl22131, Sgl31426, Sgl36739, Sgl64085, Sgl68537 ... Sgl74287, Sgl74310, Sgl77852