Basic Information
Locus ID:
Sgl21888
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Lipase (class 3)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 29306641 | 29333573 | - | Sgl21888 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 73,573.07 Da | 40.71 | 100.28 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01764 | Lipase (class 3) | 539 | 603 | 1.6E-7 | IPR002921 |
| Pfam | PF00134 | Cyclin, N-terminal domain | 40 | 98 | 1.2E-8 | IPR006671 |
| SUPERFAMILY | SSF47954 | Cyclin-like | 39 | 98 | 9.98E-11 | IPR036915 |
| SUPERFAMILY | SSF53474 | alpha/beta-Hydrolases | 540 | 619 | 5.09E-7 | IPR029058 |
| Gene3D | G3DSA:1.10.472.10 | - | 49 | 180 | 8.2E-11 | - |
| Gene3D | G3DSA:3.90.230.10 | Creatinase/methionine aminopeptidase superfamily | 2 | 39 | 8.7E-10 | IPR036005 |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 518 | 631 | 6.7E-10 | IPR029058 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 363 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G37630.3 | - | 0 |
| RefSeq | XP_010680553.1 | oxidation resistance protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q2V3B2 | Cyclin-D5-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD5-1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QMK5 | TLDc domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_161920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology