HalophFGD

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Basic Information
Locus ID: Sgl21542
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: F-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrA3 21750525 21751925 + Sgl21542
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.02 43,770.77 Da 35.23 83.65 -0.13
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 23 67 2.2E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 19 91 1.28E-6 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 1 21 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_011461652.1 PREDICTED: F-box protein At5g62510-like [Fragaria vesca subsp. vesca] 0
TrEMBL A0A803MCI1 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 8 Ah009794, Ah009803, Ah009809, Ah009813, Ah033117, Ah035364 ...
Ah035365, Ah035366
Amaranthaceae Suaeda aralocaspica 2 GOSA_00012682, GOSA_00012684
Amaranthaceae Suaeda glauca 7 Sgl21542, Sgl26859, Sgl46075, Sgl50775, Sgl66088, Sgl66212 ...
Sgl70402
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.7BG0004110, CQ.Regalona.r1.7BG0004120
Poaceae Lolium multiflorum 1 gene-QYE76_019744
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.