Basic Information
Locus ID:
Sgl21341
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Exostosin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 17492613 | 17496807 | - | Sgl21341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 34,480.41 Da | 49.40 | 75.20 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03016 | Exostosin family | 3 | 154 | 1.5E-11 | IPR040911 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 243 | 303 | 2.2E-9 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 245 | 302 | 1.49E-12 | IPR038765 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 167 | 182 | 3.5E-13 | - |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 183 | 249 | 3.5E-13 | - |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 277 | 295 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22580.1 | Exostosin family protein. | 0 |
| RefSeq | XP_021768426.1 | probable xyloglucan galactosyltransferase GT19 [Chenopodium quinoa] | 0 |
| Q9SUW1 | Probable xyloglucan galactosyltransferase GT19 OS=Arabidopsis thaliana OX=3702 GN=GT19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803L6J0 | Exostosin domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Sgl21341.