Basic Information
Locus ID:
Sgl20859
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 8896940 | 8903545 | - | Sgl20859 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 44,932.12 Da | 53.98 | 85.27 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 177 | 262 | 1.7E-12 | IPR000719 |
| Pfam | PF10440 | Ubiquitin-binding WIYLD domain | 19 | 45 | 2.8E-5 | IPR018848 |
| Pfam | PF03763 | Remorin, C-terminal region | 53 | 109 | 1.6E-13 | IPR005516 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 155 | 273 | 9.27E-23 | IPR011009 |
| Gene3D | G3DSA:2.40.50.140 | - | 255 | 338 | 2.7E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 139 | 248 | 2.0E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 174 | 389 | 11.679645 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 180 | 202 | - | IPR017441 |
| Coils | Coil | Coil | 54 | 81 | - | - |
| Coils | Coil | Coil | 288 | 308 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48210.4 | - | 0 |
| RefSeq | XP_010672613.1 | pto-interacting protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0J8CU05 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_3g059830 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 4 | Sgl15036, Sgl20171, Sgl20859, Sgl26240 |
| Apiaceae | Apium graveolens | 2 | Ag5G01785, Ag8G01818 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC120107410, gene-LOC120109347 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014142 |