Basic Information
Locus ID:
Sgl20764
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA3 | 6979674 | 7001077 | + | Sgl20764 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 97,352.51 Da | 62.04 | 68.10 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 800 | 840 | 2.67457E-20 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 798 | 845 | 6.5E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 800 | 846 | 8.39E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 782 | 851 | 3.5E-13 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 801 | 840 | 10.954966 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 278 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 77 | - | - |
| Coils | Coil | Coil | 732 | 752 | - | - |
| Coils | Coil | Coil | 89 | 109 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010694518.1 | uncharacterized protein LOC104907301 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9QXY6 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_128930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology