Basic Information
Locus ID:
Sgl20171
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 61082877 | 61086292 | - | Sgl20171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 30,759.30 Da | 45.23 | 77.10 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 72 | 165 | 8.4E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 42 | 168 | 1.68E-23 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 30 | 143 | 3.3E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 272 | 12.951704 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 97 | - | IPR017441 |
| Coils | Coil | Coil | 183 | 203 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48210.4 | - | 0 |
| RefSeq | XP_010672613.1 | pto-interacting protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0J8CU05 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_3g059830 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 4 | Sgl15036, Sgl20171, Sgl20859, Sgl26240 |
| Apiaceae | Apium graveolens | 2 | Ag5G01785, Ag8G01818 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC120107410, gene-LOC120109347 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00014142 |