HalophFGD

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Basic Information
Locus ID: Sgl20151
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: B3 domain-containing transcription factor
Maps and Mapping Data
Chromosome Start End Strand ID
chrB2 60710333 60711077 + Sgl20151
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.77 24,602.88 Da 32.75 69.01 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain 37 116 1.45E-11 IPR015300
Gene3D G3DSA:2.40.330.10 - 24 118 3.8E-12 IPR015300
ProSiteProfiles PS50863 B3 DNA-binding domain profile. 24 117 8.585643 IPR003340
Gene Ontology
Molecular Function:
GO:0003677 (DNA binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_038707772.1 B3 domain-containing transcription factor VRN1-like [Tripterygium wilfordii] 0
TrEMBL A0A2P5DZF1 B3 DNA binding domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_237260 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 36 Sgl00131, Sgl04622, Sgl05193, Sgl09662, Sgl10673, Sgl12670 ...
Sgl12748, Sgl14916, Sgl15015, Sgl15244, Sgl17903, Sgl20151, Sgl21793, Sgl21925, Sgl30244, Sgl30269, Sgl30298, Sgl32478, Sgl33194, Sgl36159, Sgl36183, Sgl36194, Sgl36845, Sgl41473, Sgl46059, Sgl48535, Sgl50756, Sgl54536, Sgl57470, Sgl59401, Sgl59877, Sgl59940, Sgl65664, Sgl69976, Sgl75125, Sgl76935
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.