HalophFGD

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Basic Information
Locus ID: Sgl20013
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Ribonuclease H protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrB2 59041791 59043293 + Sgl20013
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.18 52,776.39 Da 46.79 92.21 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF56219 DNase I-like 188 385 6.41E-18 IPR036691
Gene3D G3DSA:3.60.10.10 Endonuclease/exonuclease/phosphatase 186 386 1.1E-20 IPR036691
Best hit
Source Best Hit ID Description E-value
RefSeq XP_019107211.1 uncharacterized protein LOC109136048 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A803LKW3 Reverse transcriptase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah006560
Amaranthaceae Suaeda glauca 23 Sgl00997, Sgl06055, Sgl14869, Sgl19579, Sgl20013, Sgl22557 ...
Sgl22836, Sgl27739, Sgl27967, Sgl30420, Sgl46173, Sgl47719, Sgl50869, Sgl63797, Sgl63850, Sgl68286, Sgl68340, Sgl74388, Sgl80086, Sgl80103, Sgl80137, Sgl82541, Sgl82596
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.6BG0020600
Plumbaginaceae Limonium bicolor 1 Lb0G38238
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.