HalophFGD

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Basic Information
Locus ID: Sgl19579
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: acid phosphatase activity
Maps and Mapping Data
Chromosome Start End Strand ID
chrB2 51317776 51319173 - Sgl19579
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.36 42,553.56 Da 41.81 91.70 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01650 RT_nLTR_like 149 358 6.69193E-37 -
Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 146 230 1.6E-9 IPR000477
Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 244 357 8.3E-12 IPR000477
Best hit
Source Best Hit ID Description E-value
TAIR AT4G20520.1 RNA binding;RNA-directed DNA polymerases. 0
RefSeq XP_048503162.1 uncharacterized protein LOC125498890 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot O00370 LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 0
TrEMBL A0A803L3R0 Arogenate dehydratase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah006560
Amaranthaceae Suaeda glauca 23 Sgl00997, Sgl06055, Sgl14869, Sgl19579, Sgl20013, Sgl22557 ...
Sgl22836, Sgl27739, Sgl27967, Sgl30420, Sgl46173, Sgl47719, Sgl50869, Sgl63797, Sgl63850, Sgl68286, Sgl68340, Sgl74388, Sgl80086, Sgl80103, Sgl80137, Sgl82541, Sgl82596
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.6BG0020600
Plumbaginaceae Limonium bicolor 1 Lb0G38238
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.