Basic Information
Locus ID:
Sgl18575
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
L-arabinokinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 29249678 | 29254764 | + | Sgl18575 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 16,672.90 Da | 52.17 | 78.73 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10509 | Galactokinase galactose-binding signature | 83 | 121 | 1.1E-7 | IPR019539 |
| Pfam | PF05542 | Protein of unknown function (DUF760) | 42 | 71 | 1.0E-7 | IPR008479 |
| SUPERFAMILY | SSF54826 | Enolase N-terminal domain-like | 2 | 54 | 6.56E-8 | IPR029017 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 82 | 131 | 1.39E-8 | IPR020568 |
| Gene3D | G3DSA:3.30.390.10 | - | 1 | 70 | 7.9E-8 | IPR029017 |
| Gene3D | G3DSA:3.30.230.10 | - | 71 | 145 | 8.5E-12 | IPR014721 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 150 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G16130.1 | arabinose kinase. Similar to galactokinase. | 0 |
| RefSeq | XP_048494992.1 | L-arabinokinase isoform X4 [Beta vulgaris subsp. vulgaris] | 0 |
| O23461 | L-arabinokinase OS=Arabidopsis thaliana OX=3702 GN=ARA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S0N7 | L-arabinokinase OS=Spinacia oleracea OX=3562 GN=SOVF_007650 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 10 | Sgl00780, Sgl05792, Sgl13369, Sgl14378, Sgl18575, Sgl19546 ... |
| Brassicaceae | Brassica nigra | 1 | BniB06g033330.2N |
| Poaceae | Echinochloa crus-galli | 1 | AH02.427 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0205624 |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G819900, Tel2E01G899700, Tel4E01G514500 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132615261 |