Basic Information
Locus ID:
Sgl18419
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
SEC12-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 26382303 | 26384906 | - | Sgl18419 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 26,853.91 Da | 21.29 | 77.60 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00940 | DNA-dependent RNA polymerase | 2 | 42 | 3.1E-6 | IPR002092 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 2 | 41 | 1.78E-6 | IPR043502 |
| SUPERFAMILY | SSF50129 | GroES-like | 208 | 246 | 5.22E-9 | IPR011032 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 41 | 192 | 6.96E-13 | IPR036322 |
| Gene3D | G3DSA:1.10.150.20 | - | 1 | 44 | 9.0E-6 | - |
| Gene3D | G3DSA:3.90.180.10 | - | 194 | 246 | 1.4E-7 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 45 | 193 | 1.6E-8 | IPR015943 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01470.1 | SEC12P-like 2 protein. Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. | 0 |
| RefSeq | XP_021735541.1 | SEC12-like protein 2 [Chenopodium quinoa] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A0K9QK66 | ANAPC4_WD40 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_170150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology