Basic Information
Locus ID:
Sgl18414
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 26289344 | 26309411 | - | Sgl18414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 178,704.86 Da | 41.57 | 77.63 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1288 | 1552 | 1.73215E-90 | - |
| Pfam | PF03732 | Retrotransposon gag protein | 95 | 169 | 1.6E-8 | IPR005162 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 28 | 70 | 1.1E-12 | IPR029472 |
| Pfam | PF11721 | Malectin domain | 1021 | 1206 | 2.8E-39 | IPR021720 |
| Pfam | PF13976 | GAG-pre-integrase domain | 402 | 460 | 2.6E-7 | IPR025724 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1285 | 1549 | 1.7E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 838 | 915 | 1.46E-7 | IPR011009 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 471 | 630 | 1.03E-35 | IPR012337 |
| SUPERFAMILY | SSF52058 | L domain-like | 914 | 992 | 1.13E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1268 | 1583 | 2.7E-80 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 1021 | 1210 | 8.2E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 909 | 1017 | 4.3E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.420.10 | - | 467 | 644 | 8.8E-37 | IPR036397 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1358 | 1557 | 7.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 824 | 904 | 1.0E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1244 | 1357 | 1.5E-35 | - |
| SMART | SM00220 | serkin_6 | 1282 | 1550 | 8.7E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1282 | 1556 | 37.813408 | IPR000719 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 471 | 635 | 18.581999 | IPR001584 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1288 | 1310 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1402 | 1414 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 748 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 771 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1594 | 1614 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021760642.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Chenopodium quinoa] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R015 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_122240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology