HalophFGD

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Basic Information
Locus ID: Sgl18296
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Ribonuclease H protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrB2 24704194 24705612 - Sgl18296
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.67 52,172.70 Da 49.79 66.27 -0.52
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14111 Domain of unknown function (DUF4283) 129 269 5.4E-23 IPR025558
MobiDBLite mobidb-lite consensus disorder prediction 1 77 - -
MobiDBLite mobidb-lite consensus disorder prediction 338 390 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT2G01050.1 zinc ion binding;nucleic acid binding. 0
RefSeq XP_048502660.1 uncharacterized protein LOC125498487 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A0J8CWJ5 DUF4283 domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g033230 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 12 Sgl13083, Sgl18296, Sgl18299, Sgl20136, Sgl31113, Sgl34702 ...
Sgl47234, Sgl50881, Sgl50933, Sgl53133, Sgl80038, Sgl82471
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.