halophFGD

Basic Information

Locus ID: Sgl17967

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: F-box domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB2	21067078	21078964	-	Sgl17967

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.98	41,191.80 Da	40.34	90.38	-0.15

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	26	56	4.4E-5	IPR001810
SUPERFAMILY	SSF81383	F-box domain	18	57	2.35E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	23	59	1.3E-5	-
SMART	SM00256	fbox_2	24	64	0.0021	IPR001810
Coils	Coil	Coil	369	371	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_048631236.1	F-box/LRR-repeat protein At5g63520-like isoform X2 [Brassica napus]	0
TrEMBL	M4EK99	F-box domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14095, gene_8780
Amaranthaceae	Atriplex hortensis	1	Ah036449
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg39519
Amaranthaceae	Salicornia europaea	1	Seu_jg14814
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00016872
Amaranthaceae	Suaeda glauca	2	Sgl12725, Sgl17967