Basic Information
Locus ID:
Sgl17565
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Endoplasmin homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 17565966 | 17570855 | + | Sgl17565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 93,090.67 Da | 34.13 | 79.96 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 89 | 279 | 7.39023E-99 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 103 | 258 | 7.6E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 261 | 799 | 8.1E-219 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 349 | 628 | 9.1E-90 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 79 | 289 | 6.02E-71 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 647 | 769 | 5.36E-33 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 348 | 540 | 5.2E-73 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 541 | 627 | 7.3E-38 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 628 | 774 | 7.8E-55 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 67 | 303 | 4.2E-92 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 102 | 259 | 3.6E-9 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 57 | 811 | 3.4E-258 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 100 | 109 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 101 | 123 | 1.9E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 265 | 283 | 1.9E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 170 | 187 | 1.9E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 152 | 169 | 1.9E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 247 | 264 | 1.9E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 195 | 217 | 1.9E-71 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 100 | 1.9E-71 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 70 | 771 | 26.372343 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 812 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 795 | 812 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 509 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24190.1 | Chaperone protein htpG family protein. encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. | 0 |
| RefSeq | XP_021866552.1 | endoplasmin homolog [Spinacia oleracea] | 0 |
| Q9STX5 | Endoplasmin homolog OS=Arabidopsis thaliana OX=3702 GN=HSP90-7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QZ58 | HATPase_c domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_131150 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology