Basic Information
Locus ID:
Sgl17556
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 17508492 | 17513110 | + | Sgl17556 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 108,299.98 Da | 31.90 | 104.31 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 465 | 521 | 2.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 73 | 6.7E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 247 | 304 | 6.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 101 | 161 | 1.6E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 698 | 971 | 7.2E-45 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 348 | 606 | 4.79E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 972 | 1.27E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 80 | 427 | 2.35E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 317 | 631 | 7.7E-89 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 232 | 3.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 142 | 1.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 316 | 1.7E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 774 | 979 | 3.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 773 | 2.7E-25 | - |
| SMART | SM00369 | LRR_typ_2 | 293 | 316 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 147 | 2.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 413 | 437 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 245 | 268 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 269 | 292 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 508 | 532 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 65.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 697 | 977 | 1.2E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 973 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 818 | 830 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755306.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology