Basic Information
Locus ID:
Sgl17097
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 14027768 | 14030711 | - | Sgl17097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 60,273.36 Da | 38.15 | 71.91 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 194 | 324 | 1.58291E-35 | IPR033734 |
| CDD | cd09612 | Jacalin | 21 | 153 | 7.77112E-43 | IPR033734 |
| CDD | cd09612 | Jacalin | 393 | 516 | 7.353E-38 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 23 | 154 | 6.5E-35 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 385 | 515 | 7.5E-32 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 194 | 324 | 1.0E-26 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 11 | 154 | 1.83E-43 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 373 | 515 | 1.01E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 184 | 324 | 2.09E-36 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 152 | 7.9E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 175 | 324 | 2.2E-45 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 367 | 516 | 1.7E-52 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 21 | 154 | 1.1E-39 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 194 | 326 | 8.1E-33 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 385 | 517 | 9.4E-44 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 183 | 326 | 44.821136 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 10 | 154 | 49.754597 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 374 | 517 | 48.357094 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021758328.1 | jacalin-related lectin 3-like [Chenopodium quinoa] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LKG8 | Jacalin-related lectin 3-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology