halophFGD

Basic Information

Locus ID: Sgl16846

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: Nucleolar GTP-binding protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB2	12345242	12347888	-	Sgl16846

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.63	21,919.30 Da	47.68	83.23	-0.22

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01926	50S ribosome-binding GTPase	174	220	9.3E-9	IPR006073
Pfam	PF04570	zinc-finger of the FCS-type, C2-C2	24	56	5.7E-13	IPR007650
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	172	223	1.62E-13	IPR027417
Gene3D	G3DSA:3.40.50.300	-	163	222	1.3E-13	IPR027417
ProSiteProfiles	PS51795	Zinc finger FLZ-type profile.	29	56	10.999019	IPR007650
PRINTS	PR00326	GTP1/OBG GTP-binding protein family signature	194	212	3.4E-9	IPR006073
PRINTS	PR00326	GTP1/OBG GTP-binding protein family signature	173	193	3.4E-9	IPR006073
Coils	Coil	Coil	91	97	-	-

Gene Ontology

Molecular Function:

GO:0005525 (GTP binding)

KEGG Pathway

KO Term:

K06943 (nucleolar GTP-binding protein)

Pathway:

ko03008 (Ribosome biogenesis in eukaryotes) map03008 (Ribosome biogenesis in eukaryotes)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G80770.2	P-loop containing nucleoside triphosphate hydrolases superfamily protein.
RefSeq	XP_048495915.1	GTP-binding protein 4 isoform X2 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	B5YJ65	GTPase Obg OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=obg PE=3 SV=1
TrEMBL	A0A8S9KGJ5	OBG-type G domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q70_00044354 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	16	jg11242, jg12404, jg13289, jg1729, jg26758, jg27314, jg27316 ... jg29149, jg29747, jg29748, jg29750, jg29751, jg29752, jg29753, jg29755, jg5663
Aizoaceae	Mesembryanthemum crystallinum	3	gene_2064, gene_23154, gene_6677
Amaranthaceae	Atriplex hortensis	3	Ah004168, Ah023347, Ah028706
Amaranthaceae	Beta vulgaris	2	BVRB_5g105590, BVRB_7g169240
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg1972, Sbi_jg24403, Sbi_jg29109, Sbi_jg3323, Sbi_jg8240 ... Sbi_jg34537
Amaranthaceae	Salicornia europaea	3	Seu_jg11782, Seu_jg2799, Seu_jg6611
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00000131, GOSA_00001578, GOSA_00011619
Amaranthaceae	Suaeda glauca	9	Sgl11453, Sgl16832, Sgl16846, Sgl20858, Sgl26239, Sgl51521 ... Sgl56807, Sgl73388, Sgl76908
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000005510, gene:ENSEOMG00000008091 ... gene:ENSEOMG00000023610, gene:ENSEOMG00000024721, gene:ENSEOMG00000035522, gene:ENSEOMG00000036903, gene:ENSEOMG00000042449, gene:ENSEOMG00000048088
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.1AG0007770, CQ.Regalona.r1.2BG0021760 ... CQ.Regalona.r1.5AG0003360, CQ.Regalona.r1.5BG0003530, CQ.Regalona.r1.9BG0007340
Anacardiaceae	Pistacia vera	4	pistato.v30120260, pistato.v30125380, pistato.v30141540 ... pistato.v30234150
Apiaceae	Apium graveolens	8	Ag11G03827, Ag11G04089, Ag1G01980, Ag5G00945, Ag5G01212 ... Ag6G00751, Ag6G02205, Ag9G02128
Arecaceae	Cocos nucifera	7	COCNU_01G001660, COCNU_07G004490, COCNU_08G003410 ... COCNU_08G008390, COCNU_09G003740, COCNU_10G003130, scaffold036132G000010
Arecaceae	Phoenix dactylifera	10	gene-LOC103703330, gene-LOC103704626, gene-LOC103706359 ... gene-LOC103710804, gene-LOC103712580, gene-LOC103714075, gene-LOC103721686, gene-LOC120103819, gene-LOC120105566, gene-LOC120112586
Asparagaceae	Asparagus officinalis	5	AsparagusV1_04.1237.V1.1, AsparagusV1_04.1262.V1.1 ... AsparagusV1_04.1283.V1.1, AsparagusV1_04.1284.V1.1, AsparagusV1_04.1285.V1.1
Asteraceae	Flaveria trinervia	8	Ftri11G13176, Ftri12G01030, Ftri14G24555, Ftri3G02444 ... Ftri3G25079, Ftri4G07694, Ftri5G28006, Ftri7G33081
Brassicaceae	Arabidopsis thaliana	6	AT1G53885.1, AT1G53903.1, AT2G44670.1, AT4G17670.1 ... AT5G47060.1, AT5G49120.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10001043m.g.v1.0, Thhalv10001797m.g.v1.0 ... Thhalv10005101m.g.v1.0, Thhalv10012085m.g.v1.0, Thhalv10026417m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp1g40380.v2.2, Sp2g11870.v2.2, Sp2g19470.v2.2 ... Sp4g26750.v2.2, Sp5g02990.v2.2, Sp7g16470.v2.2
Brassicaceae	Brassica nigra	14	BniB01g001920.2N, BniB02g063780.2N, BniB02g070120.2N ... BniB02g072550.2N, BniB04g010490.2N, BniB04g015280.2N, BniB04g055220.2N, BniB05g018720.2N, BniB06g003080.2N, BniB06g026710.2N, BniB07g002030.2N, BniB07g037650.2N, BniB08g029160.2N, BniB08g074520.2N
Casuarinaceae	Casuarina equisetifolia	4	Ceq01G0783, Ceq02G1107, Ceq05G1012, Ceq09G1118
Casuarinaceae	Casuarina glauca	4	Cgl01G0574, Cgl02G1146, Cgl05G1021, Cgl09G1214
Cymodoceaceae	Cymodocea nodosa	6	gene.Cymno02g03600, gene.Cymno02g08060, gene.Cymno03g02110 ... gene.Cymno05g17570, gene.Cymno15g04200, gene.Cymno18g03360
Hydrocharitaceae	Thalassia testudinum	7	gene.Thate01g24600, gene.Thate01g30950, gene.Thate02g04240 ... gene.Thate08g06110, gene.Thate08g06420, gene.Thate08g08720, gene.Thate08g08830
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-11353, nbisL1-mrna-2667
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG01.223, evm.TU.LG04.26, evm.TU.LG10.1087 ... evm.TU.LG11.1283
Plantaginaceae	Plantago ovata	3	Pov_00016987, Pov_00022644, Pov_00032433
Plumbaginaceae	Limonium bicolor	5	Lb1G01156, Lb2G08667, Lb2G08669, Lb2G08670, Lb3G18821
Poaceae	Echinochloa crus-galli	35	AH03.2021, AH04.893, AH07.2429, AH07.3037, AH07.3039 ... AH08.1736, AH09.2084, AH09.2086, AH09.2087, AH09.2088, AH09.2089, AH09.2091, BH03.2383, BH04.1289, BH04.2200, BH07.2241, BH07.2861, BH07.2863, BH08.1782, BH09.2237, BH09.2240, BH09.2257, BH09.2258, CH03.2346, CH04.872, CH07.2311, CH07.2942, CH07.2943, CH08.1938, CH09.2388, CH09.2390, CH09.2391, CH09.2397, CH09.2399, CH09.2400
Poaceae	Eleusine coracana subsp. coracana	20	gene-QOZ80_2AG0141310, gene-QOZ80_2BG0196900 ... gene-QOZ80_2BG0196920, gene-QOZ80_2BG0196930, gene-QOZ80_4AG0306050, gene-QOZ80_4AG0306060, gene-QOZ80_4AG0306070, gene-QOZ80_4AG0306080, gene-QOZ80_4AG0306100, gene-QOZ80_4AG0306120, gene-QOZ80_4BG0337030, gene-QOZ80_4BG0337040, gene-QOZ80_4BG0337060, gene-QOZ80_4BG0337080, gene-QOZ80_6AG0536040, gene-QOZ80_6BG0489330, gene-QOZ80_8AG0632800, gene-QOZ80_8BG0661840, gene-QOZ80_9AG0691730, gene-QOZ80_9BG0718010
Poaceae	Hordeum vulgare	15	HORVU.MOREX.r3.2HG0196340.1, HORVU.MOREX.r3.2HG0196370.1 ... HORVU.MOREX.r3.2HG0196380.1.CDS1, HORVU.MOREX.r3.2HG0196390.1.CDS1, HORVU.MOREX.r3.2HG0196410.1.CDS1, HORVU.MOREX.r3.2HG0196420.1.CDS1, HORVU.MOREX.r3.2HG0196460.1.CDS1, HORVU.MOREX.r3.2HG0196470.1.CDS1, HORVU.MOREX.r3.2HG0196480.1.CDS1, HORVU.MOREX.r3.2HG0196510.1.CDS1, HORVU.MOREX.r3.2HG0196520.1.CDS1, HORVU.MOREX.r3.5HG0481530.1, HORVU.MOREX.r3.6HG0590450.1, HORVU.MOREX.r3.6HG0604990.1, HORVU.MOREX.r3.6HG0605030.1
Poaceae	Lolium multiflorum	22	gene-QYE76_000014, gene-QYE76_023392, gene-QYE76_024510 ... gene-QYE76_024525, gene-QYE76_024526, gene-QYE76_024528, gene-QYE76_024543, gene-QYE76_045859, gene-QYE76_045860, gene-QYE76_045862, gene-QYE76_045863, gene-QYE76_045865, gene-QYE76_045866, gene-QYE76_045867, gene-QYE76_045868, gene-QYE76_045869, gene-QYE76_045870, gene-QYE76_045876, gene-QYE76_045878, gene-QYE76_045880, gene-QYE76_045883, gene-QYE76_045887
Poaceae	Oryza coarctata	18	Oco03G014110, Oco03G014170, Oco03G018480, Oco04G014480 ... Oco04G019200, Oco04G019220, Oco07G014210, Oco07G014230, Oco07G014240, Oco07G014250, Oco08G013720, Oco08G013760, Oco08G013780, Oco08G013790, Oco15G013470, Oco17G005510, Oco18G005600, Oco22G010740
Poaceae	Oryza sativa	10	LOC_Os02g37970.1, LOC_Os02g46190.1, LOC_Os02g46210.1 ... LOC_Os04g49620.1, LOC_Os04g49660.1, LOC_Os04g49670.1, LOC_Os04g49680.1, LOC_Os08g34984.1, LOC_Os09g26370.1, LOC_Os11g43790.1
Poaceae	Paspalum vaginatum	13	gene-BS78_02G191700, gene-BS78_04G180200 ... gene-BS78_04G235300, gene-BS78_04G235400, gene-BS78_04G235600, gene-BS78_05G231400, gene-BS78_06G201000, gene-BS78_06G201200, gene-BS78_06G201300, gene-BS78_06G201500, gene-BS78_06G201600, gene-BS78_06G206300, gene-BS78_07G154000
Poaceae	Puccinellia tenuiflora	23	Pt_Chr0203776, Pt_Chr0203777, Pt_Chr0203788, Pt_Chr0203790 ... Pt_Chr0204425, Pt_Chr0204496, Pt_Chr0204500, Pt_Chr0301579, Pt_Chr0301580, Pt_Chr0301584, Pt_Chr0301585, Pt_Chr0301587, Pt_Chr0301588, Pt_Chr0301590, Pt_Chr0301593, Pt_Chr0301596, Pt_Chr0306577, Pt_Chr0306578, Pt_Chr0306581, Pt_Chr0306583, Pt_Chr0306585, Pt_Chr0306588, Pt_Chr0701961
Poaceae	Sporobolus alterniflorus	32	Chr06G004860, Chr06G004870, Chr09G012880, Chr09G023210 ... Chr13G008760, Chr14G014470, Chr15G006370, Chr15G006380, Chr20G004790, Chr21G013490, Chr23G002930, Chr23G002940, Chr23G002950, Chr23G002960, Chr23G002970, Chr23G005460, Chr25G004520, Chr25G004530, Chr25G004540, Chr25G004550, Chr25G004570, Chr26G014080, Chr26G014100, Chr26G014110, Chr26G014120, Chr26G014130, Chr26G014140, Chr29G004750, Chr30G004390, Chr30G004400, Chr30G004410, Chr30G004430
Poaceae	Thinopyrum elongatum	15	Tel2E01G770100, Tel2E01G770200, Tel2E01G770300 ... Tel2E01G770400, Tel2E01G770500, Tel2E01G770700, Tel2E01G770800, Tel2E01G771200, Tel2E01G771300, Tel2E01G771400, Tel2E01G771500, Tel2E01G771900, Tel5E01G356200, Tel6E01G408500, Tel6E01G485600
Poaceae	Triticum dicoccoides	43	gene_TRIDC1BG056130, gene_TRIDC2AG064700 ... gene_TRIDC2AG064710, gene_TRIDC2AG064730, gene_TRIDC2AG064740, gene_TRIDC2AG064750, gene_TRIDC2AG064760, gene_TRIDC2AG064770, gene_TRIDC2AG064820, gene_TRIDC2AG064840, gene_TRIDC2AG064850, gene_TRIDC2AG064870, gene_TRIDC2AG064880, gene_TRIDC2AG064920, gene_TRIDC2BG069100, gene_TRIDC2BG069110, gene_TRIDC2BG069120, gene_TRIDC2BG069130, gene_TRIDC2BG069140, gene_TRIDC2BG069150, gene_TRIDC2BG069160, gene_TRIDC2BG069170, gene_TRIDC2BG069180, gene_TRIDC2BG069220, gene_TRIDC2BG069250, gene_TRIDC2BG069270, gene_TRIDC2BG069290, gene_TRIDC2BG069300, gene_TRIDC2BG069320, gene_TRIDC2BG069340, gene_TRIDC5BG020150, gene_TRIDC5BG036650, gene_TRIDC5BG046290, gene_TRIDC6AG025570, gene_TRIDC6AG032150, gene_TRIDC6AG040180, gene_TRIDC6AG040190, gene_TRIDC6BG015010, gene_TRIDC6BG038380, gene_TRIDC6BG047140, gene_TRIDC6BG047150, gene_TRIDC7AG026330, gene_TRIDC7BG004970
Poaceae	Triticum aestivum	69	TraesCS2A02G453400.1.cds1, TraesCS2A02G453500.1.cds1 ... TraesCS2A02G453600.1.cds1, TraesCS2A02G453700.1.cds1, TraesCS2A02G453800.1.cds1, TraesCS2A02G453900.1.cds1, TraesCS2A02G454000.1.cds1, TraesCS2A02G454200.1.cds1, TraesCS2A02G454300.1.cds1, TraesCS2A02G454400.1.cds1, TraesCS2A02G454500.1, TraesCS2A02G454600.1.cds1, TraesCS2A02G454700.1.cds1, TraesCS2A02G454800.1, TraesCS2B02G474700.1.cds1, TraesCS2B02G474800.1.cds1, TraesCS2B02G474900.1.cds1, TraesCS2B02G475000.1.cds1, TraesCS2B02G475100.1.cds1, TraesCS2B02G475200.1.cds1, TraesCS2B02G475300.1.cds1, TraesCS2B02G475400.1.cds1, TraesCS2B02G475500.1.cds1, TraesCS2B02G475600.1.cds1, TraesCS2B02G475700.1.cds1, TraesCS2B02G475800.1.cds1, TraesCS2B02G475900.1.cds1, TraesCS2B02G476000.1.cds1, TraesCS2B02G476100.1.cds1, TraesCS2B02G476200.1.cds1, TraesCS2B02G476300.1.cds1, TraesCS2B02G476400.1.cds1, TraesCS2B02G476500.1.cds1, TraesCS2B02G476600.1.cds1, TraesCS2B02G476700.1, TraesCS2B02G476900.1, TraesCS2D02G453100.1.cds1, TraesCS2D02G453200.1.cds1, TraesCS2D02G453300.1.cds1, TraesCS2D02G453400.1.cds1, TraesCS2D02G453500.1.cds1, TraesCS2D02G453600.1.cds1, TraesCS2D02G453700.1.cds1, TraesCS2D02G453800.1.cds1, TraesCS2D02G453900.1.cds1, TraesCS2D02G454000.1.cds1, TraesCS2D02G454100.1.cds1, TraesCS2D02G454200.1.cds1, TraesCS2D02G454300.1.cds1, TraesCS2D02G454400.1.cds1, TraesCS2D02G454500.1.cds1, TraesCS2D02G454600.1.cds1, TraesCS2D02G454700.1.cds1, TraesCS2D02G454800.1.cds1, TraesCS2D02G454900.1.cds1, TraesCS2D02G455000.1, TraesCS2D02G455200.1, TraesCS5A02G216400.1, TraesCS5B02G215300.1, TraesCS5D02G224500.1, TraesCS6A02G207800.1, TraesCS6A02G262000.1, TraesCS6A02G262100.1, TraesCS6B02G236200.1, TraesCS6B02G289300.1, TraesCS6B02G289400.1, TraesCS6D02G191200.1, TraesCS6D02G242700.1, TraesCS6D02G242900.1
Poaceae	Zea mays	15	Zm00001eb040730_P002, Zm00001eb072650_P001 ... Zm00001eb072660_P001, Zm00001eb072670_P001, Zm00001eb072680_P001, Zm00001eb072700_P001, Zm00001eb165470_P001, Zm00001eb187540_P001, Zm00001eb187570_P001, Zm00001eb245880_P001, Zm00001eb250970_P001, Zm00001eb250990_P001, Zm00001eb313760_P001, Zm00001eb428170_P001, Zm00001eb428210_P001
Poaceae	Zoysia japonica	15	nbis-gene-18661, nbis-gene-19795, nbis-gene-22228 ... nbis-gene-22230, nbis-gene-22678, nbis-gene-22681, nbis-gene-22685, nbis-gene-22686, nbis-gene-30744, nbis-gene-50508, nbis-gene-5678, nbis-gene-5683, nbis-gene-5689, nbis-gene-9109, nbis-gene-9111
Poaceae	Zoysia macrostachya	18	Zma_g14152, Zma_g14153, Zma_g16594, Zma_g16899, Zma_g16900 ... Zma_g20317, Zma_g20319, Zma_g20320, Zma_g20321, Zma_g20322, Zma_g21865, Zma_g21867, Zma_g21868, Zma_g21869, Zma_g21870, Zma_g23082, Zma_g30368, Zma_g32588
Portulacaceae	Portulaca oleracea	8	evm.TU.LG04.3136, evm.TU.LG10.814, evm.TU.LG16.514 ... evm.TU.LG17.807, evm.TU.LG19.140, evm.TU.LG19.657, evm.TU.LG24.377, evm.TU.LG24.645
Posidoniaceae	Posidonia oceanica	6	gene.Posoc01g31890, gene.Posoc02g07970, gene.Posoc02g18420 ... gene.Posoc02g27740, gene.Posoc07g05850, gene.Posoc07g11780
Rhizophoraceae	Bruguiera sexangula	7	evm.TU.Scaffold_14_RagTag.460, evm.TU.Scaffold_16_RagTag.409 ... evm.TU.Scaffold_18_RagTag.805, evm.TU.Scaffold_3_RagTag.595, evm.TU.Scaffold_6_RagTag.586, evm.TU.Scaffold_7_RagTag.273, evm.TU.Scaffold_8_RagTag.1469
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-1369, nbisL1-mrna-16103, nbisL1-mrna-17897 ... nbisL1-mrna-22665, nbisL1-mrna-27503, nbisL1-mrna-8477
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-17542, nbisL1-mrna-3832, nbisL1-mrna-6736 ... nbisL1-mrna-7542
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-15204, nbisL1-mrna-20129, nbisL1-mrna-6303 ... nbisL1-mrna-8151, nbisL1-mrna-8273
Rhizophoraceae	Kandelia candel	7	evm.TU.utg000007l.101, evm.TU.utg000011l.337 ... evm.TU.utg000018l.143, evm.TU.utg000019l.853, evm.TU.utg000022l.246, evm.TU.utg000028l.165, evm.TU.utg000079l.20
Rhizophoraceae	Kandelia obovata	7	Maker00003066, Maker00007570, Maker00010491, Maker00012392 ... Maker00014243, Maker00018612, Maker00018749
Rhizophoraceae	Rhizophora apiculata	7	nbisL1-mrna-13740, nbisL1-mrna-16208, nbisL1-mrna-19750 ... nbisL1-mrna-21609, nbisL1-mrna-3387, nbisL1-mrna-8869, nbisL1-mrna-9483
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-10643, nbisL1-mrna-18194, nbisL1-mrna-18839 ... nbisL1-mrna-22820, nbisL1-mrna-3656, nbisL1-mrna-6470
Salicaceae	Populus euphratica	8	populus_peu02937, populus_peu03099, populus_peu14374 ... populus_peu22228, populus_peu22238, populus_peu31852, populus_peu33833, populus_peu33972
Solanaceae	Lycium barbarum	7	gene-LOC132621343, gene-LOC132633541, gene-LOC132635218 ... gene-LOC132640720, gene-LOC132640725, gene-LOC132642211, gene-LOC132645839
Solanaceae	Solanum chilense	5	SOLCI001873400, SOLCI002611400, SOLCI002759600 ... SOLCI003767100, SOLCI004422000
Solanaceae	Solanum pennellii	6	gene-LOC107009337, gene-LOC107013742, gene-LOC107021754 ... gene-LOC107023010, gene-LOC107026977, gene-LOC107028703
Tamaricaceae	Reaumuria soongarica	3	STRG.16229_chr06_-, STRG.23853_chr05_-, gene_8522
Tamaricaceae	Tamarix chinensis	7	TC01G3729, TC05G0576, TC05G0578, TC06G2395, TC09G0393 ... TC11G1559, TC12G1654
Zosteraceae	Zostera marina	10	Zosma01g03040.v3.1, Zosma01g03050.v3.1, Zosma01g28090.v3.1 ... Zosma02g06020.v3.1, Zosma03g18610.v3.1, Zosma03g18800.v3.1, Zosma03g18950.v3.1, Zosma03g18960.v3.1, Zosma04g26380.v3.1, Zosma06g05650.v3.1