Basic Information
Locus ID:
Sgl16193
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 8098147 | 8099904 | - | Sgl16193 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 53,478.97 Da | 52.70 | 73.55 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04873 | ACT_UUR-ACR-like | 431 | 482 | 0.00728118 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 23 | 208 | 2.9E-40 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 295 | 340 | 3.1E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 294 | 354 | 1.83E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 284 | 355 | 1.1E-16 | IPR036638 |
| SMART | SM00353 | finulus | 297 | 346 | 1.6E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 291 | 340 | 16.856483 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 304 | - | - |
| Coils | Coil | Coil | 330 | 350 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_021767200.1 | transcription factor MYC2-like [Chenopodium quinoa] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M360 | BHLH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology