Basic Information
Locus ID:
Sgl15331
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB2 | 865181 | 889261 | + | Sgl15331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.32 | 71,826.80 Da | 35.80 | 80.67 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 337 | 542 | 3.2E-33 | IPR000719 |
| Pfam | PF03101 | FAR1 DNA-binding domain | 112 | 194 | 2.2E-11 | IPR004330 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 321 | 617 | 1.21E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 299 | 403 | 1.9E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 600 | 5.9E-42 | - |
| SMART | SM00220 | serkin_6 | 336 | 579 | 1.9E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 564 | 28.103352 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 342 | 364 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 432 | 444 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021767444.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X3 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MI52 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00014604, GOSA_00014605, GOSA_00014807, GOSA_00023619 |
| Amaranthaceae | Suaeda glauca | 69 | Sgl00340, Sgl00670, Sgl00740, Sgl00768, Sgl02587, Sgl03588 ... |
| Plumbaginaceae | Limonium bicolor | 3 | Lb0G37147, Lb3G20849, Lb6G29885 |
| Tamaricaceae | Reaumuria soongarica | 2 | MSTRG.16888_chr09_+, STRG.24247_chr10_+ |