Basic Information
Locus ID:
Sgl14916
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
B3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 61162473 | 61165632 | + | Sgl14916 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 44,342.46 Da | 44.97 | 77.12 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06839 | GRF zinc finger | 23 | 66 | 1.4E-10 | IPR010666 |
| Pfam | PF02362 | B3 DNA binding domain | 198 | 279 | 1.8E-7 | IPR003340 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 189 | 279 | 1.55E-13 | IPR015300 |
| SUPERFAMILY | SSF68906 | SAP domain | 332 | 367 | 4.81E-5 | IPR036361 |
| Gene3D | G3DSA:2.40.330.10 | - | 182 | 281 | 1.3E-13 | IPR015300 |
| Gene3D | G3DSA:1.10.720.30 | SAP domain | 318 | 374 | 2.7E-5 | IPR036361 |
| SMART | SM01019 | B3_2 | 190 | 280 | 9.6E-8 | IPR003340 |
| ProSiteProfiles | PS50800 | SAP motif profile. | 334 | 368 | 8.807532 | IPR003034 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 312 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048492452.1 | uncharacterized protein LOC125493290 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0J8B8S1 | zf-GRF domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_9g225730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||