Basic Information
Locus ID:
Sgl13602
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
AMADH2
Description:
Belongs to the aldehyde dehydrogenase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 34065132 | 34073286 | + | Sgl13602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.64 | 32,273.77 Da | 33.87 | 87.48 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03109 | ABC1 family | 204 | 238 | 4.4E-6 | IPR004147 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 64 | 125 | 1.3E-6 | IPR036322 |
| SUPERFAMILY | SSF53720 | ALDH-like | 135 | 181 | 8.69E-6 | IPR016161 |
| Gene3D | G3DSA:2.130.10.10 | - | 21 | 128 | 4.5E-7 | IPR015943 |
| Gene3D | G3DSA:3.40.605.10 | Aldehyde Dehydrogenase; Chain A, domain 1 | 129 | 184 | 1.1E-8 | IPR016162 |
| SMART | SM00320 | WD40_4 | 62 | 117 | 0.0039 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 290 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01860.1 | Transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_021836523.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC110776284 [Spinacia oleracea] | 0 |
| O04895 | Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus OX=28502 GN=BADH4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9RJC5 | WD_REPEATS_REGION domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_059860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||