Basic Information
Locus ID:
Sgl13200
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 25980355 | 25995473 | - | Sgl13200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 107,406.93 Da | 31.15 | 89.83 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 645 | 909 | 1.39359E-92 | - |
| Pfam | PF00940 | DNA-dependent RNA polymerase | 2 | 49 | 4.4E-6 | IPR002092 |
| Pfam | PF11721 | Malectin domain | 378 | 563 | 1.3E-39 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 642 | 906 | 7.1E-48 | IPR001245 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 2 | 42 | 6.67E-6 | IPR043502 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 625 | 940 | 1.09E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 271 | 349 | 3.57E-13 | - |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 48 | 208 | 6.41E-16 | IPR036322 |
| Gene3D | G3DSA:2.60.120.430 | - | 378 | 567 | 3.9E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 601 | 714 | 7.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 375 | 9.6E-16 | IPR032675 |
| Gene3D | G3DSA:2.130.10.10 | - | 40 | 224 | 8.7E-28 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 914 | 3.6E-58 | - |
| SMART | SM00220 | serkin_6 | 639 | 907 | 8.7E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 913 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 759 | 771 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 645 | 667 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 951 | 971 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021760642.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Chenopodium quinoa] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R015 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_122240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology