Basic Information
Locus ID:
Sgl12748
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
B3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 20610392 | 20613551 | - | Sgl12748 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 49,189.92 Da | 42.76 | 77.24 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06839 | GRF zinc finger | 23 | 66 | 1.6E-10 | IPR010666 |
| Pfam | PF02362 | B3 DNA binding domain | 244 | 325 | 2.2E-7 | IPR003340 |
| SUPERFAMILY | SSF68906 | SAP domain | 378 | 413 | 6.64E-5 | IPR036361 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 235 | 325 | 1.88E-13 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 228 | 327 | 1.6E-13 | IPR015300 |
| SMART | SM01019 | B3_2 | 236 | 326 | 9.6E-8 | IPR003340 |
| ProSiteProfiles | PS50800 | SAP motif profile. | 380 | 414 | 8.827508 | IPR003034 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 358 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048492452.1 | uncharacterized protein LOC125493290 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0J8B8S1 | zf-GRF domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_9g225730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||