halophFGD

Basic Information

Locus ID: Sgl12725

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: F-box LRR-repeat protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrA2	20318295	20330244	-	Sgl12725

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.30	57,447.10 Da	39.35	87.04	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	26	56	6.7E-5	IPR001810
SUPERFAMILY	SSF81383	F-box domain	19	57	3.66E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	23	59	2.0E-5	-
SMART	SM00256	fbox_2	24	64	0.0021	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_024024180.1	F-box/LRR-repeat protein At5g63520 isoform X4 [Morus notabilis]	0
TrEMBL	W9RDL8	F-box/LRR-repeat protein OS=Morus notabilis OX=981085 GN=L484_006830 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14095, gene_8780
Amaranthaceae	Atriplex hortensis	1	Ah036449
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg39519
Amaranthaceae	Salicornia europaea	1	Seu_jg14814
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00016872
Amaranthaceae	Suaeda glauca	2	Sgl12725, Sgl17967