Basic Information
Locus ID:
Sgl12373
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ring finger protein 181
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 17326689 | 17327441 | - | Sgl12373 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.56 | 29,077.86 Da | 53.49 | 67.44 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 189 | 238 | 1.0E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 189 | 244 | 6.63E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 142 | 244 | 9.8E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 190 | 237 | 1.6E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 190 | 238 | 12.312242 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19950.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021754447.1 | RING-H2 finger protein ATL22-like [Chenopodium quinoa] | 0 |
| Q3T0W3 | E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1 | 0 | |
| TrEMBL | A0A026W143 | RING-type domain-containing protein OS=Ooceraea biroi OX=2015173 GN=DMN91_007710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||