Basic Information
Locus ID:
Sgl12184
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 15872840 | 15877391 | + | Sgl12184 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 108,027.57 Da | 31.71 | 104.02 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 696 | 969 | 7.1E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 463 | 519 | 2.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 2.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 71 | 6.7E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 245 | 302 | 6.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 684 | 970 | 1.27E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 425 | 1.73E-65 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 390 | 618 | 2.62E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 141 | 1.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 314 | 629 | 5.7E-89 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 977 | 3.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 771 | 2.7E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 313 | 1.6E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 229 | 1.0E-24 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 411 | 435 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 314 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 530 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 2.8 | IPR003591 |
| SMART | SM00220 | serkin_6 | 695 | 975 | 1.2E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 267 | 290 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 218 | 92.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 695 | 971 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755306.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology