Basic Information
Locus ID:
Sgl12136
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
prolyl 4-hydroxylase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA2 | 15511408 | 15519558 | - | Sgl12136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 47,414.60 Da | 55.16 | 85.79 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd20262 | Complex1_LYR_LYRM2 | 11 | 72 | 1.45423E-18 | - |
| Pfam | PF05347 | Complex 1 protein (LYR family) | 15 | 69 | 6.9E-14 | IPR008011 |
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 215 | 328 | 1.7E-18 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 127 | 330 | 2.5E-77 | - |
| SMART | SM00702 | p4hc | 135 | 332 | 4.4E-59 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 211 | 337 | 10.683226 | IPR005123 |
| Coils | Coil | Coil | 35 | 55 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20270.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_010667434.1 | probable prolyl 4-hydroxylase 3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LN20 | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0J8DWZ0 | Fe2OG dioxygenase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_008730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology